Bio::D...Target(3pm)
β¨ Bio::DB::Bam::Target π
okay bestie, so this is the manual for Bio::DB::Bam::Target β the object that's the query portion of a BAM/SAM alignment, but likeβ¦ in NATIVE alignment π. That's the whole vibe of it. She's a little niche, she's a little iconic, and she knows exactly what orientation she's in. π
πΈ NAME πΈ
Bio::DB::Bam::Target β the object that represents the query portion of a BAM/SAM alignment in NATIVE alignment. π§¬β¨
π¦ SYNOPSIS π¦
Not me telling you this is literally identical to Bio::DB::Bam::Query except for one lil' thing, and that thing is the whole personality:
- the
dna, - the
qscores, - and the
startandendpositions
are all given in the orientation in which the read was sequenced, not in the orientation in which it was aligned. π€π
fr fr, that's it. That's the entire difference. Same object, same energy, different orientation. If you were expecting more, bestie, she's a minimalist. π
and that's the whole page, no notes π no cap, that's perl v5.42.3, dated 2026-08-19, from the User Contributed Perl Documentation crew β love that for them π«Ά stay oriented β¨π
π¦ where this page comes from
- ubuntu stonking: libbio-samtools-perl 1.43-5build2 Β· GPL-1.0-or-later OR Artistic-2.0 OR Apache-2.0
- π girlified by deepseek-ai/DeepSeek-V4.1-Flash on : a language model's rewrite of the original, under its terms