Bio::B...Article(3pm)

💖 Bio::Biblio::PubmedJournalArticle — bestie edition 💖

okay so real talk, this is the Bio::Biblio::PubmedJournalArticle page from the User Contributed Perl Documentation crew, and it's literally just the glow-up representation of a PUBMED journal article. no cap. sit down, grab a boba, and let's get into it 🧋✨

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✨ VERSION ✨

version 1.70 — yes she's got a version number and yes she's serving 💅

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🦋 SYNOPSIS 🦋

here's the vibe, two ways to do the exact same thing:

    $obj = Bio::Biblio::PubmedJournalArticle->new(

                  # some attributes from MedlineJournalArticle
                  -title => 'Thermal adaptation analyzed by comparison of protein sequences from mesophilic and extremely thermophilic Methanococcus species.',
                  -journal => Bio::Biblio::MedlineJournal->new(-issn => '0027-8424'),
                  -volume => 96,
                  -issue => 7,

                  # and some from PubmedArticle
                  -pubmed_history_list =>
                       [ { 'pub_status' => 'pubmed',
                           'date' => '2001-12-1T10:0:00Z' },
                         { 'pub_status' => 'medline',
                           'date' => '2002-1-5T10:1:00Z' } ],
                   -pubmed_status => 'ppublish');
  #--- OR ---

    $obj = Bio::Biblio::PubmedJournalArticle->new();
    $obj->title ('...');
    $obj->journal (Bio::Biblio::MedlineJournal->new(-issn => '0027-8424'));
    $obj->pubmed_status ('ppublish');

like… you can dump everything in the constructor at once, or build her up piece by piece. both are valid. both eat. no wrong answers bestie 💜

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🌸 DESCRIPTION 🌸

so this class is a storage object for a PUBMED journal article. that's her job. that's her whole arc. she holds the data and she holds it well. 😌

want to see where she sits in the class hierarchy? the family tree pic is right here, go look at your girl's lineage:

http://www.ebi.ac.uk/~senger/openbqs/images/bibobjects_perl.gif

🎀 Attributes 🎀

ngl this is the plot twist: there are no specific attributes in this class. zero. none of her own.

BUT — and this is the important part, don't skip it — you can totally set and get all the attributes defined in the parent classes. she inherited them. generational wealth of attributes. 👑

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🌈 SEE ALSO 🌈

• OpenBQS home page

http://www.ebi.ac.uk/~senger/openbqs/

• Comments to the Perl client

http://www.ebi.ac.uk/~senger/openbqs/Client_perl.html

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💬 FEEDBACK 💬

📬 Mailing lists 📬

user feedback is, and I quote, an integral part of the evolution of this and other Bioperl modules. so send your comments and suggestions, preferably to the Bioperl mailing list. your participation is much appreciated, fr fr 🫶

  bioperl-l@bioperl.org                  - General discussion
  http://bioperl.org/wiki/Mailing_lists  - About the mailing lists

🆘 Support 🆘

okay listen, usage questions and support issues go to the mailing list:

bioperl-l@bioperl.org

and not straight to the module maintainer, bestie. please. 🙈 there are lots of experienced and responsive experts on there who'll look at your problem and address it quickly. and when you write in, include a thorough description of the problem with code and data examples if at all possible. the more detail the better, that's the whole vibe. 📝

🐛 Reporting bugs 🐛

found a bug? report it to the Bioperl bug tracking system so they can keep track of the bugs and their resolution. bug reports can be submitted via the web:

  https://redmine.open-bio.org/projects/bioperl/

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⚖️ LEGAL ⚖️

👑 Authors 👑

Martin Senger <senger@ebi.ac.uk>

📜 Copyright and License 📜

This software is Copyright (c) by 2002 European Bioinformatics Institute and released under the license of the same terms as the perl 5 programming language system itself.

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and that's the whole page, you're officially an expert 💖

this was served up by perl v5.36.0 on 2023-02-14 — happy valentine's day from the Bio::B...Article(3pm) girlies 💌🎀✨