Bio::B...rticle(3pm)

📦 version 1.70, in debian trixie, ubuntu noble, ubuntu resolute, ubuntu stonking

💖 Bio::B...rticle — Bio::Biblio::MedlineJournalArticle ✨

okay bestie, gather round, because we're about to talk about Bio::Biblio::MedlineJournalArticle — the literal representation of a MEDLINE journal article. it's a Perl module (a 3pm page, iykyk) and honestly? she's iconic. 💅

VERSION: this one is version 1.70. periodt.

🌸 SYNOPSIS 🌸

here's the vibe — two ways to bring her into existence. first, the one-shot glow-up where you pass everything at once:

$obj = Bio::Biblio::MedlineJournalArticle->new(
              -title => 'Thermal adaptation analyzed by comparison of protein sequences from mesophilic and extremely thermophilic Methanococcus species.',
              -journal => Bio::Biblio::MedlineJournal->new(-issn => '0027-8424'),
              -volume => 96,
              -issue => 7);
#--- OR ---

and then the slow-burn version, where you make her first and set the attributes after:

$obj = Bio::Biblio::MedlineJournalArticle->new();
$obj->title ('...');
$obj->journal (Bio::Biblio::MedlineJournal->new(-issn => '0027-8424'));

no cap, both of these work. pick your fighter. 🥊

🦋 DESCRIPTION 🦋

so like, what even is she? 💭 she's a storage object for a MEDLINE journal article. that's the whole job. she holds the article data, she sits pretty in the class hierarchy. 🫶

if you wanna see exactly where she lives in that hierarchy (it's giving family tree, it's giving ancestry dot com), check out the class hierarchy diagram at:

http://www.ebi.ac.uk/~senger/openbqs/images/bibobjects_perl.gif

✨ Attributes ✨

these are the attributes that are specific to this class — like, hers and hers alone. (though ngl, you can also set and get all the attributes defined in the parent classes, so she's not gatekeeping anything from the fam 💜)

  • journal — type: Bio::Biblio::MedlineJournal 📓

👑 SEE ALSO 👑

the receipts, the lore, the further reading:

  • OpenBQS home page — the mothership 🛸

http://www.ebi.ac.uk/~senger/openbqs/

  • Comments to the Perl client — where you go to talk to the Perl client directly 💬

http://www.ebi.ac.uk/~senger/openbqs/Client_perl.html

💌 FEEDBACK 💌

🌈 Mailing lists 🌈

okay so this is the important part: user feedback is an integral part of the evolution of this module and all the other Bioperl modules. like, she literally grows because you talk to her. 🧚 send your comments and suggestions preferably to the Bioperl mailing list — your participation is much appreciated, fr fr. 🥹

bioperl-l@bioperl.org                  - General discussion
http://bioperl.org/wiki/Mailing_lists  - About the mailing lists

🫶 Support 🫶

please please please direct your usage questions and support issues to the mailing list:

bioperl-l@bioperl.org

...rather than sliding into the module maintainer's DMs directly. 🙈 there are so many experienced and responsive experts on there who will look at your problem and address it quickly, and that's the dream. also, if at all possible, include a thorough description of the problem along with code and data examples. give them the full picture, bestie, they're doing this out of love. 💖

🐛 Reporting bugs 🐛

found a bug? report it to the Bioperl bug tracking system so we can keep track of the bugs and their resolution — no bug left behind. 🫡 bug reports can be submitted via the web at:

https://redmine.open-bio.org/projects/bioperl/

✍️ Authors ✍️

  • Martin Senger <senger@ebi.ac.uk>
  • Heikki Lehvaslaiho <heikki@bioperl.org>

legends, both of them. 👑

this software is Copyright (c) by 2002 European Bioinformatics Institute and is released under the license of the same terms as the perl 5 programming language system itself. so, y'know, same energy as Perl. 🐪

and that's the whole page, bestie!! 🎀 this manual page came to you from perl v5.36.0, dated 2023-02-14 — happy valentine's day to the Perl documentation, I guess, she ate that. 💖✨ bye ily, go write some Bib objects 🦋🌸💅

📦 where this page comes from