TRADIS_...T_SITES(1p)

πŸ“¦
version 1.4.5 Β· 3 versions
, in debian bookworm, ubuntu jammy

✨ TRADIS_...T_SITES(1p) ✨

okay so bestie, welcome to the User Contributed Perl Documentation corner of the internet πŸ’– this one's a little Perl script manual and honestly? it's giving useful. let's get into it.


🌸 NAME 🌸

tradis_gene_insert_sites β€” Generate insertion site details from TraDIS pipeline plots 🧬


πŸŽ€ VERSION πŸŽ€

version 1.4.5 β€” yes she's on 1.4.5, no cap πŸ‘‘


πŸ¦‹ SYNOPSIS πŸ¦‹

bestie. there is literally nothing here. the SYNOPSIS section is empty. no usage line, no flags, nothing. we move. πŸ’…

✨ DESCRIPTION ✨

okay so here's the vibe 🌈 This script is for TRADIS analysis. It takes in a plot file created by the TRADIS pathogen informatics pipeline, plus an embl file of annotation.

Then β€” and this is the slay part β€” it outputs a tab delimited file with the insert site details πŸŽ€

That file then gets used as input to an R script to calculate essentiality. it's a whole pipeline bestie, we're just one link in the chain πŸ”₯


πŸ’œ NAME πŸ’œ

tradis_gene_insert_sites.pl

(yes, another NAME section. the script itself. iconic behaviour honestly 😌)


🫢 CONTACT 🫢

path-help@sanger.ac.uk

Original author: Lars Barquist ⭐


🧚 METHODS 🧚

nothing here either bestie. METHODS is empty. we simply do not have methods today πŸ’€

πŸ‘‘ AUTHOR πŸ‘‘

Carla Cummins <path-help@sanger.ac.uk>


This software is Copyright (c) 2013 by Wellcome Trust Sanger Institute.

This is free software, licensed under:

The GNU General Public License, Version 3, June 2007
fr fr it's GPL v3, June 2007. free software, so go wild (responsibly) πŸ’–

and that's the whole page bestie πŸ₯° this was pulled from perl v5.30.0, dated 2020-01-11 β€” a whole vintage moment. go generate those insertion site details, you've got this πŸ’…βœ¨πŸ¦‹

πŸ“¦ where this page comes from