BP_TREE2PAG(1p)

💖 BP_TREE2PAG 💖

ok so bestie. this is a page from the User Contributed Perl Documentation collection, and it's about a lil script called bp_tree2pag. buckle up, it's short and it's slay 🎀

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✨ NAME ✨

bp_tree2pag — convert Bio::TreeIO parseable format trees to pagel format 🌳➡️🌸

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🌈 SYNOPSIS 🌈

ok so here's the vibe, three whole ways to run it:

bp_tree2pag -if nexus -i file.nexus > file.pag

or, bestie, you can pipe it in through STDIN and switch to newick format instead:

cat file.newick | bp_tree2pag -if newick > file.nh

or you can just specify an output and an input, main character energy:

bp_tree2pag -o file.pag -i file.newick

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🦋 DESCRIPTION 🦋

so what does it actually do? it converts TreeIO parseable files into Pagel format tree files. literally that's the whole job and it does it 💅

⚠️ okay but listen, be warned: pagel format only really supports a single tree per file, so. yeah. one tree. that's the limit. don't come for me.

🙈 also, Pagel parsing is not yet available in bioperl. so like, reading it back? not yet a thing. noted. periodt.

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anyway that's the whole page, short and sweet like a lil snack 🍓 this cutie was documented as part of perl v5.32.1, dated 2021-08-15, mwah 💋 bye bestie!! 🫶✨