BP_REMOTE_BLAST(1p)

πŸ’… BP_REMOTE_BLAST β€” ok so let's talk

Hey bestie 🫢 welcome to the BP_REMOTE_BLAST(1p) page, aka the glow-up guide for bp_remote_blast.pl. It lives in the User Contributed Perl Documentation section, so it's giving scrappy-community-icon energy, not stuffy-official-manual energy, and honestly? We love that for it. ✨


🌸 NAME 🌸

bp_remote_blast.pl β€” it's a script for submitting jobs to a remote blast server (specifically the ncbi blast queue at this time, iykyk).


πŸŽ€ SYNOPSIS πŸŽ€

Like, the whole vibe in one line:

% bp_remote_blast.pl -p blastp -d ecoli -e 1e-5 -i myseqs.fa

That's it. That's the moment. πŸ’–


πŸ¦‹ DESCRIPTION πŸ¦‹

So here's the tea: this module runs a remote blast on a set of sequences by submitting them to the NCBI blast queue, and then it prints the output of the request. That's literally the whole job description. No cap. It yeets your sequences at NCBI, waits, and hands you back the results like the main character it is. πŸ‘‘


πŸ’Œ FEEDBACK πŸ’Œ

πŸ“¬ Mailing Lists

User feedback is an integral part of the evolution of this and other Bioperl modules β€” fr fr, your voice actually matters here. Send your comments and suggestions preferably to the Bioperl mailing list. Your participation is much appreciated. 🫢

bioperl-l@bioperl.org                  - General discussion
http://bioperl.org/wiki/Mailing_lists  - About the mailing lists

πŸ› Reporting Bugs

Report bugs to the Bioperl bug tracking system to help us keep track the bugs and their resolution. Bug reports can be submitted via the web:

https://github.com/bioperl/bioperl-live/issues

(Yes bestie, tell them everything. The bugs deserve to be seen. πŸ’€)


πŸ‘‘ AUTHOR - Jason Stajich πŸ‘‘

Email: jason-at-bioperl-dot-org


And that's the whole page, bestie! πŸŽ€ This lil' beauty comes to you courtesy of perl v5.30.0, dated 2020-05-12, from the User Contributed Perl Documentation collection. Periodt. ✨

πŸ“¦ where this page comes from