ONTOGETUP(1e)

📦 version 6.6.0, in debian bookworm, debian trixie, ubuntu jammy, ubuntu noble, ubuntu questing, ubuntu resolute, ubuntu stonking

💖 ONTOGETUP 💖

okay bestie, gather round, because this one's a lil EMBOSS cutie from the Debian manual for EMBOSS (that's 1e, section one-e, and yes the title is literally ONTOGETUP 🦋) and she does exactly one thing but she does it well. Let me tell you everything, fr fr, no detail left behind. 🎀

✨ NAME ✨

ontogetup — get ontology term(s) by id of child 🌸

✨ SYNOPSIS ✨

ontogetup -oboterms obo [-obsolete boolean] -outfile outobo

ontogetup -help

✨ DESCRIPTION ✨

So ontogetup is a command line program from EMBOSS — and since you're gonna ask, that stands for “the European Molecular Biology Open Software Suite” 💅 — and she lives in the command group "Ontology,Data retrieval:Ontology data". That's her whole vibe, that's her whole lane, and she is iconic for it. 👑

✨ OPTIONS ✨

🌸 Input section 🌸

  • -oboterms obo — the input, bestie. Give her your obo file. 🫶

🌸 Additional section 🌸

  • -obsolete boolean — okay so the default behaviour is to not use or return obsolete terms. If you set this option, though, it'll include all terms. Default value: N. 💀 (yes, obsoletes are just sitting there, lurking, waiting for you to say yes)

🌸 Advanced section 🌸

(nothing here, she's mysterious like that, an empty room with main character energy ✨)

🌸 Output section 🌸

  • -outfile outobo — where the output obo goes. Slay. 💖
and also, ontogetup -help exists, obviously, because she's helpful like that. 🧚

✨ BUGS ✨

Found a bug? 😭 Don't suffer in silence, bestie — bugs can be reported to the Debian Bug Tracking system (http://bugs.debian.org/emboss), or straight to the EMBOSS developers (http://sourceforge.net/tracker/?group_id=93650&atid=605031). Go tell them, they wanna know. 🫶

✨ SEE ALSO ✨

ontogetup is fully documented via the tfm(1) system. iykyk 👑

✨ AUTHOR ✨

Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>

  • wrote the script used to autogenerate this manual page. iconic behaviour, honestly. 🎀

This manual page was autogenerated from an Ajax Control Definition of the EMBOSS package. It can be redistributed under the same terms as EMBOSS itself. 🌈

okay and the lil sign-off at the bottom, the source/version + date teaser: this whole thing is EMBOSS 6.4.0, dated 05/11/2012 💜 — yes, a vintage queen, and she still ate. periodt. 💅✨

📦 where this page comes from