OCTANOL(1e)

📦 version 6.6.0, in debian bookworm, debian trixie, ubuntu jammy, ubuntu noble, ubuntu questing, ubuntu resolute, ubuntu stonking

✨ OCTANOL ✨

okay bestie so this is the manual for OCTANOL, straight out of the EMBOSS Manual for Debian 💖 it lives in section 1e of the manual pages, iykyk.

🌸 NAME 🌸

octanol — Draw a White-Wimley protein hydropathy plot 🧬✨

🦋 SYNOPSIS 🦋

octanol -sequence sequence [-datafile datafile] [-width integer]
        -graph xygraph [-plotoctanol boolean] [-plotinterface boolean]
        [-plotdifference boolean]

octanol -help

💜 DESCRIPTION 💜

octanol is a command line program from EMBOSS (“the European Molecular Biology Open Software Suite”). no cap, that's the whole bio. 🌈

it's part of the "Protein:Properties" command group(s). periodt. 👑

🎀 OPTIONS 🎀

💅 Input section

  • -sequence sequence — your protein sequence goes here, bestie. 🧚
  • -datafile datafile — the data file it reads from.
    • Default value: Ewhite-wimley.dat

🍓 Additional section

  • -width integer — the width, as an integer. that's the vibe.
    • Default value: 19

🌈 Output section

  • -graph xygraph — the output xy graph. iconic. 📈
  • -plotoctanol boolean — whether to plot octanol.
    • Default value: N
  • -plotinterface boolean — whether to plot the interface.
    • Default value: N
  • -plotdifference boolean — whether to plot the difference.
    • Default value: Y

💀 BUGS 💀

found a bug? not me being the bearer of bad news 😭 you can report it to the Debian Bug Tracking system (http://bugs.debian.org/emboss), or slide directly into the EMBOSS developers' DMs at (http://sourceforge.net/tracker/?group_id=93650&atid=605031). 🫶

👑 SEE ALSO 👑

octanol is fully documented via the tfm(1) system. go read it, it's giving lore. 📚

🦋 AUTHOR 🦋

Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>

  • Wrote the script used to autogenerate this manual page. 🛠️✨

This manual page was autogenerated from an Ajax Control Definition of the EMBOSS package. It can be redistributed under the same terms as EMBOSS itself. 💖

EMBOSS 6.4.0 · 05/11/2012 — yeah that's the source, version and date, and that's the whole page bestie, ty for coming to my ted talk, slay 💅🎀✨

📦 where this page comes from