SNP2HGVS(1)

💖 SNP2HGVS 💖

okay so bestie, you're in the NCBI Entrez Direct User's Manual section of the man pages and this little icon is called snp2hgvs ✨ she's tiny, she's focused, she does exactly one job and she does it flawlessly, no cap.

✨ NAME ✨

snp2hgvs — extract HGVS records from Entrez SNP document summaries 💅

🦋 SYNOPSIS 🦋

snp2hgvs

that's it. that's the whole synopsis. no flags, no arguments, no drama. she takes zero options and she is thriving 🎀

🌸 DESCRIPTION 🌸

okay so here's the tea, bestie 🍓

snp2hgvs reads Entrez single nucleotide polymorphism document summaries straight from standard input 📥 and then writes the Human Genome Variation Society records they contain out to standard output 📤.

that's it. that's the vibe. pipe your SNP docsums in one side, get your HGVS records out the other side. it's giving glow-up pipeline ✨ literally the simplest main character in the whole Entrez Direct lineup and honestly? obsessed 😭

ngl she's a filter, not a destination — so if you're sitting there waiting for her to prompt you for a filename, she will not. standard input or nothing, periodt 👑

💜 SEE ALSO 💜

• efetch(1)
• hgvs2spdi(1)
• snp2tbl(1)
• spdi2tbl(1)
• xtract(1)

go read those too, they're all part of the same friend group and they ate 🔥

and that's the whole page, bestie!! this gem is brought to you by NCBI, dated 2023-02-03, living rent free in the NCBI Entrez Direct User's Manual 🫶💖