RNR-LSI(1)

💖 NAME 💖

rnr-lsi — computes three flavors of leaf stability index for each taxon ✨

🌸 DESCRIPTION 🌸

okay bestie, listen up, because this one is so cute and also very specific 🫶

This is RnR-lsi version 1.0.1, released by Andre J. Aberer in 2021-06-07. Iconic. Historic. A whole moment.

So what does it actually do? This program computes three flavors of leaf stability index for each taxon. Three flavors!! Like a lil ice cream shop but for phylogenetics 🍓🍦🍓

Here's the syntax, keep it close:

rnr-lsi -i <bootTrees> -n <runId> [-w <workingDir>] [-h]

✨ OBLIGATORY ✨

these ones are not optional, babe, you have to bring them to the party 💅

• -i <bootTrees> — a collection of bootstrap trees. the whole point of the vibe check 🌳
• -n <runId> — an identifier for this run. name your child, give it a lil tag 🏷️

🎀 OPTIONAL 🎀

these ones are the accessories. cute but not required ✨

• -x <excludeFile> — prune the taxa in the file first (one taxon per line), before computing the lsi. bye bye, not you 🚪👋
• -w <workDir> — a working directory where output files are created. where the magic gets written down 📁
• -h — this help file. hi hello welcome 🫶

👑 AUTHOR 👑

This manpage was written by Nilesh Patra for the Debian distribution and can be used for any other usage of the program. slay, honestly 💖

ok that's the whole thing, bestie — no cap, that's all of it 🌈

rnr-lsi 1.0.1 — October 2021 🦋 mwah, go compute those leaf stability indices, you main character 💜