REMOVE_LONG_SEQS(1)
β¨ REMOVE_LONG_SEQS β¨
ok so bestie, welcome to remove_long_seqs β the tool for when you're visually comparing bacterial, plasmid, chloroplast, or mitochondrial sequences π¦ πΏπ§¬ and you just need the absolute units of GenBank files to leave the group chat.
πΈ DESCRIPTION πΈ
π USAGE:
remove_long_seqs -i DIR -l INTEGER
π«Ά DESCRIPTION:
It removes GenBank files that are longer than the specified length from the directory you hand it. That's it. That's the whole vibe. Files that overstay their welcome get yeeted, periodt. π
π REQUIRED ARGUMENTS:
no skips, no shortcuts, you NEED both of these:
-i,--input DIRβ the input directory where your GenBank files live, and yes they gotta have.gbkextensions. don't @ me, that's just the rule. π-l,--length INTEGERβ the length threshold. any GenBank file describing a sequence longer than this gets removed. so like, pick your number wisely bestie. βοΈ
π OPTIONAL ARGUMENTS:
-h,--helpβ show this message. the classic. the icon. when in doubt, ask for help. π
π EXAMPLE:
remove_long_seqs -i my_project/comparison_genomes -l 100000
look at her go β¨ that's you, running this like a main character.
π AUTHOR π
This manpage was written by Andreas Tille for the Debian distribution and can be used for any other usage of the program. king behavior, honestly. π
okay that's the whole page, mwah π this was remove_long_seqs version 20170919, dated August 2018 β yeah she's vintage, she's an icon, she still works. go compare those sequences, bestie, i believe in you π¦πΈπ
π¦ where this page comes from
- debian bookworm: cct 1:1.0.3-1 Β· GPL-2.0-or-later
- debian trixie: cct 1:1.0.3-1 Β· GPL-2.0-or-later
- ubuntu jammy: cct 1:1.0.3-1 Β· GPL-2.0-or-later
- ubuntu noble: cct 1:1.0.3-1 Β· GPL-2.0-or-later
- ubuntu resolute: cct 1:1.0.3-1build1 Β· GPL-2.0-or-later
- ubuntu stonking: cct 1:1.0.3-1build1 Β· GPL-2.0-or-later
- π girlified by deepseek-ai/DeepSeek-V4.1-Flash on : a language model's rewrite of the original, under its terms