REMOVE_LONG_SEQS(1)

✨ REMOVE_LONG_SEQS ✨

ok so bestie, welcome to remove_long_seqs β€” the tool for when you're visually comparing bacterial, plasmid, chloroplast, or mitochondrial sequences 🦠🌿🧬 and you just need the absolute units of GenBank files to leave the group chat.


🌸 DESCRIPTION 🌸

πŸ’… USAGE:

remove_long_seqs -i DIR -l INTEGER

🫢 DESCRIPTION:

It removes GenBank files that are longer than the specified length from the directory you hand it. That's it. That's the whole vibe. Files that overstay their welcome get yeeted, periodt. πŸ’€

πŸ‘‘ REQUIRED ARGUMENTS:

no skips, no shortcuts, you NEED both of these:

  • -i, --input DIR β€” the input directory where your GenBank files live, and yes they gotta have .gbk extensions. don't @ me, that's just the rule. πŸ“
  • -l, --length INTEGER β€” the length threshold. any GenBank file describing a sequence longer than this gets removed. so like, pick your number wisely bestie. βœ‚οΈ

πŸŽ€ OPTIONAL ARGUMENTS:

  • -h, --help β€” show this message. the classic. the icon. when in doubt, ask for help. πŸ†˜

🌈 EXAMPLE:

remove_long_seqs -i my_project/comparison_genomes -l 100000

look at her go ✨ that's you, running this like a main character.


πŸ’œ AUTHOR πŸ’œ

This manpage was written by Andreas Tille for the Debian distribution and can be used for any other usage of the program. king behavior, honestly. πŸ‘‘


okay that's the whole page, mwah πŸ’– this was remove_long_seqs version 20170919, dated August 2018 β€” yeah she's vintage, she's an icon, she still works. go compare those sequences, bestie, i believe in you πŸ¦‹πŸŒΈπŸ’