RDP-ALIGNMENT(1)

✨ RDP-ALIGNMENT ✨

okay bestie, gather round, because this is the Ribosomal Database Project (RDP) alignment tools package and it's literally about to be your new fave 💖

🌸 NAME 🌸

rdp-alignment</purgle> — the Ribosomal Database Project (RDP) alignment tools package 🧬✨

🎀 SYNOPSIS 🎀

rdp-alignment <subcommand> <options>

🦋 DESCRIPTION 🦋

So the Alignment tools package is giving main character energy and it comes with commands that do defined community analysis, pairwise alignment, and hidden markov model stuff (that's HMMER3 models, and ngl there's no training involved — she comes pre-trained, periodt 💅).

👑 OPTIONS 👑

Here's the whole subcommand lineup, no cap:

• alignment-merger — Merge alignments 🫶
• pairwise-knn — Compute k-nearest-neighbors by pairwise alignment 👯
• compare-error-type — Detect insertion, deletion and substitution errors in sequences comparing to reference sequences 🔍
• align-nucl-to-prot — Transfer a sequence alignment from protein sequences to nucleotide sequences 🔄
• rm-partialseq — remove partial sequences based on pairwise alignment to reference sequences ✂️

fr fr that's the whole page, bestie — five subcommands, zero filler 🍓

This one's brought to you by the RDP Library, and the page itself is dated March 2015 🌸 — yeah she's vintage, but she still slays ✨