PROVEAN(1)

✨ NAME ✨

okay so bestie, meet provean — the Protein Variation Effect Analyzer 💅 that's the whole name, that's the whole vibe, she analyzes protein variation effects and she's iconic for it 🧬✨

🦋 DESCRIPTION 🦋

🌸 USAGE:

the way you run her is literally just this, no cap:

provean [Options]

that's it. that's the invocation. you call provean, you hand her some [Options], and she does her thing 👑

💖 OPTIONS 💖

okay so real talk — this page lists the flags but does not spell out what each one does, so I'm giving you every single one exactly as written, no invented lore, periodt 🙈 every one of these takes a <string> unless it says otherwise:

• -q <string> — short flag, takes a string, that's the tea 🍓
• -d <string> — another string-taker, lowercase letter energy 💜
• -v <string> — yep, string again, she's consistent ✨
• --psiblast <string> — long flag, takes a string, iykyk 🦋
• --cdhit <string> — takes a string, iconic name honestly 🎀
• --blastdbcmd <string> — takes a string, say it three times fast 😭
• --quiet — no argument, no string, she just goes quiet 🤫 not a single value attached
• --supporting_set <string> — takes a string, very supportive bestie behavior 🫶
• --save_supporting_set <string> — also takes a string, saving that support for later 💾
• --subject_sequences <string> — takes a string, main character sequences only 👑
• --num_threads <integer, >=1> — takes an integer that has to be >=1, and the default is 1 🔥 so if you don't say anything she runs with one thread, no more no less
• --tmp_dir <string> — takes a string, that's your temp directory moment 🌈

fr fr: that's every option on the page, nothing skipped, nothing merged, nothing invented 💀 don't come for me about descriptions — the page doesn't have them, so neither do I 🙈

and that's the whole manual, bestie 💖 this was provean version 1.1.5+ds, dated April 2022 — slay, obsessed, go analyze some protein variation effects 💅✨🌸