PAUVRE(1)

✨ PAUVRE ✨

okay so bestie, welcome to the pauvre manual page — it's a User Commands situation and honestly it's giving main character energy for anyone living their long-read era. 💅

🌸 NAME 🌸

pauvre — QC and genome browser plotting Oxford Nanopore and PacBio long reads 🦋

💖 DESCRIPTION 💖

bestie, here's the whole vibe in one line, no cap:

usage: pauvre [-h] [-v]
       {browser,custommargin,marginplot,redwood,stats,synplot} ...

🎀 optional arguments:

• -h, --help — shows this help message and then dips, that's it, that's the whole job 🫶
• -v, --version — spits out the installed pauvre version, iconic behaviour fr fr ⭐

🦋 [sub-commands]:

so basically you've got six whole sub-commands to choose from, and yes you have to pick one, the vibes are non-negotiable 💀

• browser — an adaptable genome browser with various track types 🌈 literally so many track types, it's adaptable, it said what it said
• custommargin — plot custom marginal histograms of tab-delimited files 📊 your files, your margins, your rules
• marginplot — plot a marginal histogram of a fastq file 🧚 give it a fastq, get a marginal histogram back
• redwood — make a redwood plot from a bam file 🌲 bam file in, redwood plot out, periodt
• stats — outputs stats from a fastq file 🔥 just pure, unfiltered stats
• synplot — make a synteny plot from a gff file, protein alignment, and partition file 👑 that's three whole inputs: a gff file, a protein alignment, and a partition file — don't come at it with two, it needs all three

💜 AUTHOR 💜

This manpage was written by Andreas Tille for the Debian distribution and can be used for any other usage of the program. 🎀

and that's the whole page bestie, you ate it 💅✨

this was pauvre 0.1924, dated April 2020 — mwah, go plot something gorgeous 🦋💖🎀