mia-2dimag...projection(1)

📦
version 2.4.7 · 2 versions
, in ubuntu noble, ubuntu resolute, ubuntu stonking

💖 mia-2dimageseries-maximum-intensity-projection 💖

okay bestie, listen up — this is a General Commands Manual page for the program mia-2dimageseries-maximum-intensity-projection, and yes the name is a whole paragraph, we don't make the rules. she's part of the mia family, she's about images, and honestly? she's iconic for it.

✨ NAME ✨

mia-2dimageseries-maximum-intensity-projection — evaluate maximum per-pixel intensities of an image series. 🎀

basically: you hand her a whole stack of images, she looks at every single pixel position across all of them, and she keeps the brightest one. bestie behavior fr fr. 🔥

🌸 SYNOPSIS 🌸

mia-2dimageseries-maximum-intensity-projection -o <out-file> [options]

🦋 DESCRIPTION 🦋

so like, mia-2dimageseries-maximum-intensity-projection — this program is used to evaluate the per-pixel maximum intensity of an image series. that's it, that's the whole job. no cap. she's not doing the most, she's doing the maximum, per pixel. 💅

👑 OPTIONS 👑

  • -o, --out-file=(output, required); io — the output image. yes it's required, she's not optional about it, and it's tagged io. for which file types are supported, scroll down to PLUGINS:2dimage/io 🫶

🎀 Help & Info 🎀

  • -V, --verbose=warning — how chatty she is. prints messages of the given priority level and higher priorities. supported priorities, starting at the lowest level, are:
    • trace — function call trace
    • debug — debug output
    • info — low level messages
    • message — normal messages
    • warning — warnings
    • fail — report test failures
    • error — report errors
    • fatal — report only fatal errors
  • --copyright — print copyright information 💜
  • -h, --help — print this help
  • -?, --usage — print a short help
  • --version — print the version number and exit

⭐ Processing ⭐

  • --threads=-1 — maxiumum number of threads to use for processing. this number should be lower or equal to the number of logical processor cores in the machine. (-1: automatic estimation). like, if you set it too high she's gonna be fighting herself for cores and it's giving chaos 😭

🌈 PLUGINS: 2dimage/io 🌈

these are all the file-type besties she can talk to. mind the extensions, they're exact!!

  • bmp — BMP 2D-image input/output support. the plug-in supports reading and writing of binary images and 8-bit gray scale images. read-only support is provided for 4-bit gray scale images. the color table is ignored and the pixel values are taken as literal gray scale values.
    • recognized file extensions: .BMP, .bmp
    • supported element types: binary data, unsigned 8 bit
  • datapool — virtual IO to and from the internal data pool
    • recognized file extensions: .@
  • dicom — 2D image io for DICOM
    • recognized file extensions: .DCM, .dcm
    • supported element types: signed 16 bit, unsigned 16 bit
  • exr — a 2dimage io plugin for OpenEXR images
    • recognized file extensions: .EXR, .exr
    • supported element types: unsigned 32 bit, floating point 32 bit
  • jpg — a 2dimage io plugin for jpeg gray scale images
    • recognized file extensions: .JPEG, .JPG, .jpeg, .jpg
    • supported element types: unsigned 8 bit
  • png — a 2dimage io plugin for png images
    • recognized file extensions: .PNG, .png
    • supported element types: binary data, unsigned 8 bit, unsigned 16 bit
  • raw — RAW 2D-image output support
    • recognized file extensions: .RAW, .raw
    • supported element types: binary data, signed 8 bit, unsigned 8 bit, signed 16 bit, unsigned 16 bit, signed 32 bit, unsigned 32 bit, floating point 32 bit, floating point 64 bit
  • tif — TIFF 2D-image input/output support
    • recognized file extensions: .TIF, .TIFF, .tif, .tiff
    • supported element types: binary data, unsigned 8 bit, unsigned 16 bit, unsigned 32 bit
  • vista — a 2dimage io plugin for vista images
    • recognized file extensions: .-, .V, .VISTA, .v, .vista
    • supported element types: binary data, signed 8 bit, unsigned 8 bit, signed 16 bit, unsigned 16 bit, signed 32 bit, unsigned 32 bit, floating point 32 bit, floating point 64 bit

🧚 EXAMPLE 🧚

mia-2dimageseries-maximum-intensity-projection

(that's literally what the page shows you, bestie — go add your -o <out-file> and make it real ✨)

💜 AUTHOR(s) 💜

Gert Wollny

This software is Copyright (c) 1999‐2015 Leipzig, Germany and Madrid, Spain. It comes with ABSOLUTELY NO WARRANTY and you may redistribute it under the terms of the GNU GENERAL PUBLIC LICENSE Version 3 (or later). For more information run the program with the option --copyright. ⭐

fr, read the license before you redistribute, that's the vibe check 👑

and that's the whole page, babe 💖 she's from the USER COMMANDS section, version v2.4.7, and that's a wrap — go make some maximum-intensity projections, you absolute main character 🌟💅🦋

📦 where this page comes from