LEON(1)

💖 NAME 💖

leon — reference free compression for NGS reads ✨

🎀 OPTIONS 🎀

✨ leon options ✨

• -file (1 arg) — bestie this is literally THE input file. It's giving "give me a FASTA/FASTQ if you're compressing, or a .leon file if you're decompressing" energy. One arg, no cap. 🍓
• -c (0 arg) — compression mode, let's GOOO 🔥
• -d (0 arg) — decompression mode, the reverse slay 💅
• -nb-cores (1 arg) — how many cores you wanna flex with. default is whatever cores your machine has available. [default '0'] 👑
• -lossless (0 arg) — switch to lossless compression for qualities. > default is lossy, okay?? and lossy has much higher compression rate, and honestly the loss is in fact a gain. lossy is better! periodt. 💀✨

🌸 compression options 🌸

• -kmer-size (1 arg) — size of a kmer. [default '31'] 🧚
• -abundance (1 arg) — abundance threshold for solid kmers (default is inferred). [default ''] 🦋
• -init-iterator (0 arg) — init iterator for ibank mode 🔥
• -seq-only (0 arg) — store dna seq only, header and quals are discarded, will decompress to fasta. it's literally the same as -noheader -noqual, iykyk 💖
• -noheader (0 arg) — discard header 🙈
• -noqual (0 arg) — discard quality scores ✨

💜 AUTHOR 💜

This manpage was written by Andreas Tille for the Debian distribution and can be used for any other usage of the program. 🫶

okay that's the whole vibe check bestie, this was leon version 1.4.1, dated May 2018 — mwah, iconic, go compress something 💅🎀🌈