HITS_TO_FASTQ(1)

πŸ’– NAME πŸ’–

hits_to_fastq β€” bestie, this one makes a fastq so you can go mapping, and it builds it out of your significant kmers 🧬✨


🌸 SYNOPSIS 🌸

hits_to_fastq -k <significant_kmers.txt> -b <bonferroni_correction>

πŸ¦‹ DESCRIPTION πŸ¦‹

Okay so real talk: hits_to_fastq creates a fastq for mapping from significant kmers. That's the whole vibe, that's the assignment, and it ate πŸ’…


✨ OPTIONS ✨

πŸŽ€ Required (yes bestie, you NEED these)

  • -k, --kmers β€” your significant kmers. Like, the actual list of them, in the format that seer spits out. No kmers, no fastq, it's giving nothing 🫢
  • -b, --bonf β€” the Bonferroni correction you wanna use. The manpage literally says try 10e-8, so that's the recommended starting point, periodt πŸ“Š

🌈 Optional (only if you want)

  • -h, --help β€” displays this message. That's it, that's the whole job, and honestly? iconic πŸ‘‘

πŸ‘‘ AUTHOR πŸ‘‘

This manpage was written by Andreas Tille for the Debian distribution, and lowkey the glow-up is that it can be used for any other usage of the program too 🌟


fr fr that's the whole page, no notes, go map something πŸ’€πŸ§š

hits_to_fastq 1.1.2 Β· March 2017 β€” mwah, thanks for reading bestie, slay your kmers πŸ’–βœ¨πŸŽ€