GT-LOCCHECK(1)

✨ GT-LOCCHECK ✨

okay bestie, so this is gt-loccheck — the GenomeTools girlie whose whole personality is checking parent-child containment in your GFF3 input. yes literally. she looks at your features and goes "is this child actually inside its parent tho? 🤨" and she will let you know. 💅

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🌸 NAME 🌸

gt-loccheck — Checks parent-child containment in GFF3 input. 🧚

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🦋 SYNOPSIS 🦋

gt loccheck [GFF3_file ...]

so you just hit her with gt loccheck and optionally a list of GFF3 files, and she does her thing. no cap. ✨

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💖 DESCRIPTION 💖

okay so here's the whole rundown, and it's honestly short and sweet, main character behaviour fr fr:

• -help — display help and exit. she tells you what's up, then she dips. 🫶
• -version — display version information and exit. just the receipts, then bye. 👑

that's it. that's the whole menu. she's lowkey mysterious like that. 💀

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😭 REPORTING BUGS 😭

found a bug? not her being messy 💀 — go tell the devs, they wanna know:

Report bugs to https://github.com/genometools/genomehi... no wait, exactly this: https://github.com/genometools/genometools/issues

please actually report it tho, don't just screenshot it and send it to the group chat 🙈

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🌈 SEE ALSO 🌈

okay so like, the rest of the GenomeTools fam is out there doing their own iconic things — go check the other gt subcommands if you're feeling nosy. iykyk. 💜

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this page is brought to you by GenomeTools 1.6.6, dated 11/09/2025 — yes, she's been out here serving containment checks since forever, and she ate. periodt. 🎀