GREPSEQ(1)
GREPSEQ π
okay bestie, so this is grepseq from the User Commands section of the manual (that's section 1 for the uninitiated β iykyk π«Ά). It's grep, but make it sequence-coded. Let's get into it π
β¨ NAME β¨
grepseq β <optional description of the program>
like. that's literally it. the description is a placeholder, she's mysterious, she's giving "i'll tell you when i'm ready" π
π¦ SYNOPSIS π¦
grepseq [options] <pattern> <files ...>
so you hand her some options, you hand her a pattern, you hand her some files, and she goes to work. main character energy fr fr β¨
π OPTIONS π
-h,--helpβ shows this help message and then dips. exits. periodt. π-c,--countβ bestie she is NOT going to print your normal output, she's just gonna print a count of the matching lines for each input file. and listen β if you also use the-v,--invert-matchoption (scroll down, it's there), she counts the non-matching lines instead. okay? okay. π-H,--with-filenameβ prints the filename for every single match. no more mystery matches, she's naming names π£οΈπ₯-i,--ignore-caseβ ignores case distinctions in both the pattern and the input files.ABCandabcare the same girlie now, no cap π-m NUM,--max-count=NUMβ stop reading a file afterNUMmatching lines. okay so the details matter here: when the-cor--countoption is also used,grepseqdoes not output a count greater thanNUM. and when the-vor--invert-matchoption is also used,grepstops after outputtingNUMnon-matching lines. (yes she saidgrepthere, we love her for it, keeping it exact π) so basically:NUMis the limit, respect it β-N,--names-onlyβ searches only sequence names. Cannot be used with-S. pick a lane bestie π-S,--sequences-onlyβ searches only sequences. Cannot be used with-N. same energy, opposite direction π¦-v,--invert-matchβ inverts the sense of matching, so she selects the non-matching lines. it's giving "not like the other matches" π
πΈ AUTHOR πΈ
This manpage was written by Andreas Tille for the Debian distribution and can be used for any other usage of the program. ty for your service king π«‘π
and that's the whole page bestie, you ate that πβ¨ this was grepseq version 1.2.12, dated March 2017 β yeah she's vintage, she's classic, she's still iconic ππ mwah π
π¦ where this page comes from
- debian bookworm: python3-biotools 1.2.12-5 Β· BSD-2-Clause
- debian trixie: python3-biotools 1.2.12-6 Β· BSD-2-Clause
- ubuntu jammy: python3-biotools 1.2.12-5 Β· BSD-2-Clause
- ubuntu noble: python3-biotools 1.2.12-5 Β· BSD-2-Clause
- ubuntu resolute: python3-biotools 1.2.12-6 Β· BSD-2-Clause
- ubuntu stonking: python3-biotools 1.2.12-6 Β· BSD-2-Clause
- π girlified by deepseek-ai/DeepSeek-V4.1-Flash on : a language model's rewrite of the original, under its terms