GETVARIANCE(1)

πŸ“¦
version 0.7.5 Β· 4 versions
, in ubuntu jammy, ubuntu noble

✨ getVariance ✨

okay bestie, buckle up, we're doing statistics πŸ’… this is getVariance, a User Command fr fr β€” she estimates the variance of your MCMC samples, no cap πŸ”₯


πŸ¦‹ SYNOPSIS πŸ¦‹

getVariance -o <outFileName>  [OPTIONS] [sampleFiles]

Like… you must give her an output file, everything else is negotiable πŸ’–


🌸 DESCRIPTION 🌸

She estimates variance of MCMC samples β€” and not just from one replicate, she'll handle 1 or multiple replicates, she's versatile like that πŸ‘‘

[sample Files] should contain transposed MCMC samples from replicates.

that part matters!! transposed!! don't come to her with untransposed samples and then act surprised, iykyk πŸ™ˆ


πŸ’œ OPTIONS πŸ’œ

  • --help β€” shows this help information, for when you're lost in the sauce 🧚
  • -l, --log β€” use logged values. (default: Off) so like, off unless you say otherwise, periodt
  • --norm=<normalization> β€” normalization constants for each input file, given as a comma separated list of doubles (e.g. 1.0017,1.0,0.9999). one per file bestie, don't skip any πŸ’€
  • -o <outFileName>, --outFile=<outFileName> β€” name of the output file. this one's mandatory, main character energy ⭐
  • -t <type>, --type=<type> β€” type of variance, possible values: [sample,sqDif] for sample variance or squared difference. (default: sample) pick your fighter πŸŽ€
  • -v, --verbose β€” verbose output. (default: Off) turn it on if you wanna hear her yap (affectionate) 🌈

that's the whole page bestie, go forth and estimate some variance πŸ’–βœ¨

so like, tiny sign-off: this whole vibe is getVariance 0.7.5+dfsg, dated September 2021 🫢 she's been iconic since then, no notes πŸ’…

πŸ“¦ where this page comes from