FETCH_GENOME_BY_ACCESSION(1)

πŸ¦‹ NAME πŸ¦‹

okay so bestie, meet fetch_genome_by_accession β€” she's the one you call when you wanna do the visually comparing bacterial, plasmid, chloroplast, or mitochondrial sequences thing πŸ’…. That's the whole vibe. That's her job.

This is a page from the User Commands corner of the manual, and she's serving main character energy the entire time.


✨ DESCRIPTION ✨

πŸŽ€ USAGE:

fetch_genome_by_accession -a STRING -o DIR

🌸 DESCRIPTION:

Literally just downloads a GenBank record for you, using the accession number. That's it. That's the whole plot. You give her an accession, she goes and gets the GenBank file. Slay 🫢

πŸ”₯ REQUIRED ARGUMENTS:

These ones are not optional, babe. You need them or nothing happens.

  • -a, --accession STRING β€” the accession number of the sequence you wanna download. Yes it's required. No you can't skip it πŸ™ˆ
  • -o, --output DIR β€” the output directory where the GenBank file gets downloaded into. Also required. She needs to know where to put the goods.

⭐ OPTIONAL ARGUMENTS:

  • -h, --help β€” shows you this message. Your little emergency escape hatch πŸ’–

πŸ’€ EXAMPLE:

fetch_genome_by_accession -a NC_007719 -o my_project/reference_genome

look at her go. iconic behavior honestly πŸ‘‘


πŸ‘‘ AUTHOR πŸ‘‘

This manpage was written by Andreas Tille for the Debian distribution, and it can be used for any other usage of the program. Respect the author, periodt 🫑


and that's the tea, bestie πŸ’œ this was fetch_genome_by_accession 2017... from August 2018, and yeah the version string really is just 2017... like that β€” she's mysterious, she's got lore, we don't question it. mwah, bye!! πŸŽ€βœ¨