FAITHPD(1)

📦 version 1.6.1, in debian bookworm, debian trixie, ubuntu jammy, ubuntu noble, ubuntu questing, ubuntu resolute, ubuntu stonking

💖 FAITHPD ✨

faithpd — the high-performance phylogenetic diversity calculator, bestie 💅 she's fast, she's faithful (literally), and she's about to compute Faith's PD for you like it's nothing 🦋

🌸 SYNOPSIS 🌸

faithpd -i <biom> -t <newick> -o <out.txt>

🎀 DESCRIPTION 🎀

okay so here's the whole vibe: you give her a table, you give her a tree, and she gives you numbers back. group chat energy, but make it phylogenetics 🧚

  • -i — the input BIOM table bestie, she needs the data 💖
  • -t — the input phylogeny in newick, like, the tree shape 🌈
  • -o — the output series, where the results go ✨

👑 Citations (yes, we cite, we're academic AND iconic) 📚

for Faith's PD, pls see:

Faith Biological Conservation 1992; DOI: 10.1016/0006-3207(92)91201-3

no cap, that's the real one, go read it, it's giving foundational 🫶

💜 AUTHOR 💜

this manpage was written by Nilesh Patra for the Debian distribution, and it can be used for any other usage of the program 💖

okay that's the whole page!! sending u off with the deets: this is faithpd 0.10.0, dated July 2021 🌸 mwah, go compute something beautiful, bestie 💅✨

📦 where this page comes from