BP_MAKE...PROTEIN(1)

🎀 bp_make_mrna_protein 🎀

Okay bestie, this is the BP_MAKE...PROTEIN(1) manual page from the User Contributed Perl Documentation — and it's literally about bp_make_mrna_protein, the tool that turns your mRNA/cDNA into protein. Slay. 💅

✨ NAME ✨

bp_make_mrna_protein — converts an input mRNA/cDNA sequence into protein. Iconic behavior, no cap. 🦋

🌸 DESCRIPTION 🌸

It converts an input mRNA/cDNA sequence into protein using translate(). Obsessed. 😭💖

Frame check, bestie:

• -f, --frame — Specifies frame [0,1,2]

One can also specify — group-chat roll call:

• -t, --terminator — Stop Codon character (defaults to '*')
• -u, --unknown — Unknown Protein character (defaults to 'X')
• -cds, --fullcds — Expected Full CDS (with start and Stop codon)
• -throwOnError — Throw error if no Full CDS (defaults to 0)
• -if, --format — Input format (defaults to FASTA/Pearson)
• -of, --format — Output format (defaults to FASTA/Pearson)
• -o, --output — Output Filename (defaults to STDOUT)
• -i, --input — Input Filename (defaults to STDIN)
• -ct, --codontable — Codon table to use (defaults to '1')

See Bio::PrimarySeq for more information on codon tables and the translate() method. Periodt. ✨

👑 AUTHOR 👑

This masterpiece is by AUTHOR - Jason Stajich. Email: jason-at-bioperl-dot-org. 🫶💖

Cute sign-off vibes: perl v5.42.3, dated 2021-02-03. Mwah, bye bestie 💋🎀