ACE2SAM(1)

✨ ace2sam ✨

okay so this is the manual page for ace2sam (User Commands, section 1) 💖 it's the ace to sam converter, and honestly it's giving very focused tool energy 💅

📖 NAME

ace2sam is the ace to sam converter 🦋

🎀 SYNOPSIS

ace2sam [-pc] <in.ace>

💜 OPTIONS

• -p — output padded SAM ✨
• -c — write the contig sequence in SAM 🌸

Notes time, bestie, don't skip these 🙈

1. Fields must appear in the following order: (CO->[BQ]->(AF)->(RD->QA)) 💅
2. The order of reads in AF and in RD must be identical 🫶
3. Except in BQ, words and numbers must be separated by a single SPACE or TAB 🍓
4. This program writes the headerless SAM to stdout and header to stderr 😭 so it's split up, stdout gets the body and stderr gets the header ✨

ngl this is the part people mess up, so keep the field order and read order straight 💀

🌈 AUTHOR

This manpage was written by Andreas Tille for the Debian distribution, and it can be used for any other usage of the program 🧚

okay that's the whole tea 🫶 ace2sam 1.2, December 2015, slay forever 👑💖