DALIGNER(1)

✨ DALIGNER(1) ✨ General Commands Manual 🎀

🦋 NAME

okay bestie, the name says it all 💖 daligner is all about finding local alignments between long nucleotide sequencing reads 🧬✨

🌸 SYNOPSIS

daligner [options] files...

the vibe is simple: you call daligner, toss in whatever [options] you want, then hand it your files... 💅

💜 DESCRIPTION

okay so these tools let you find all the significant local alignments between reads stored in a Dazzler database 🫶 the reads are assumed to come from a Pacific Biosciences RS II long read sequencer 🔥

and the reads are literally long AND noisy, up to 15% on average 😭 but that's just the situation, we still slay it 👑

🎀 OPTIONS

okay so for the full rundown of every command and its options, you need to check out /usr/share/doc/daligner/README.md 📖🌈 that's the source of truth, bestie 💅

October 2016 🍓 DALIGNER(1) 🧚 — manual by the Dazzler crew, 'cause this page is lowkey iconic ✨ periodt 💖