DALIGNER(1)
✨ DALIGNER(1) ✨ General Commands Manual 🎀
🦋 NAME
okay bestie, the name says it all 💖 daligner is all about finding local alignments between long nucleotide sequencing reads 🧬✨
🌸 SYNOPSIS
daligner [options] files...the vibe is simple: you call daligner, toss in whatever [options] you want, then hand it your files... 💅
💜 DESCRIPTION
okay so these tools let you find all the significant local alignments between reads stored in a Dazzler database 🫶 the reads are assumed to come from a Pacific Biosciences RS II long read sequencer 🔥
and the reads are literally long AND noisy, up to 15% on average 😭 but that's just the situation, we still slay it 👑
🎀 OPTIONS
okay so for the full rundown of every command and its options, you need to check out /usr/share/doc/daligner/README.md 📖🌈 that's the source of truth, bestie 💅
October 2016 🍓 DALIGNER(1) 🧚 — manual by the Dazzler crew, 'cause this page is lowkey iconic ✨ periodt 💖
📦 where this page comes from
- debian bookworm: daligner 1.0+git20221215.bd26967-1 · BSD-3-Clause~EWM
- debian trixie: daligner 1.0+git20240119.335105d-3 · BSD-3-Clause~EWM
- ubuntu jammy: daligner 1.0+git20200727.ed40ce5-3 · BSD-3-Clause~EWM
- ubuntu noble: daligner 1.0+git20240119.335105d-2 · BSD-3-Clause~EWM
- ubuntu questing: daligner 1.0+git20240119.335105d-3
- ubuntu resolute: daligner 1.0+git20240119.335105d-3build1 · BSD-3-Clause~EWM
- ubuntu stonking: daligner 1.0+git20240119.335105d-3build1 · BSD-3-Clause~EWM
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