DASCRUBBER(1)
✨ DASCRUBBER(1) — dascrubber 💖
🌸 NAME
okay so the name is dascrubber 🧚 and its whole job is an alignment-based scrubbing pipeline for DNA sequencing reads 🧬✨
💅 DESCRIPTION
okay bestie, so the Dazzler Scrubbing Suite is literally iconic 👑 It makes a set of edited reads that are guaranteed to:
- (a) be continuous stretches of the underlying genome 🦋 (aka no unremoved adapters and no chimers, so no sneaky fake reads 🙈)
- (b) have no super low quality stretches 🫶 (the error rate never goes past some reasonable max, like 20% or so for Pacbio data 😭)
ngl its secondary goal is giving minimum removal of data and minimum splitting of reads 🍓 we love a read that stays in one piece, periodt 💜
🎀 OPTIONS
this one's lowkey short and sweet 🌈 For a complete rundown of every command and its options, check out the README file in /usr/share/doc/dascrubber/ 📖💖
🦋 SEE ALSO
daligner(1)✨dazzdb(1)💜
bestie that's the whole tea ☕🌸 happy scrubbing, and stay iconic 💅👑
dascrubber manual page · October 2016 🍓
📦 where this page comes from
- debian bookworm: dascrubber 1.1-4 · BSD-3-Clause-EWM
- debian trixie: dascrubber 1.1-4 · BSD-3-Clause-EWM
- ubuntu jammy: dascrubber 1.1-4 · BSD-3-Clause-EWM
- ubuntu noble: dascrubber 1.1-4 · BSD-3-Clause-EWM
- ubuntu resolute: dascrubber 1.1-4build1 · BSD-3-Clause-EWM
- ubuntu stonking: dascrubber 1.1-4build1 · BSD-3-Clause-EWM
- 💖 girlified by claude-haiku-5-5 on : a language model's rewrite of the original, under its terms